GetBonNie for building, analyzing and sharing rule-based models

نویسندگان
چکیده

برای دانلود رایگان متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

GetBonNie for building, analyzing and sharing rule-based models

SUMMARY GetBonNie is a web-based application for building, analyzing and sharing rule-based models encoded in the BioNetGen language (BNGL). Tools accessible within the GetBonNie environment include (i) an applet for drawing graphs that correspond to BNGL code; (ii) a network-generation engine for translating a set of rules into a chemical reaction network; (iii) simulation engines that impleme...

متن کامل

RuleHub:An environment for developing and sharing rule-based models

Rule-based modeling (RBM) is a molecule centric representation of biological systems that enables a direct translation of knowledge about protein-protein interactions, posttranslational modifications, and enzyme catalysis into executable models. Many models have been developed using this paradigm, but presently there is no centralized database or standard annotation system that allows modelers ...

متن کامل

Analyzing Transaction Logs for Building Coordination Models

Tasks like supply chain management, design of interorganizational workkow and design of virtual organizations or consortia, require mechanisms to analyze interaction requirements spanning across autonomous organizations. While existing means of analysis would help in identifying pertinent actors and interactions among them, properties which could manifest by virtue of the interactions themselve...

متن کامل

ConstructAide: Analyzing and Visualizing Construction Siteshrough Photographs and Building Models

We describe a set of tools for analyzing, visualizing, and assessing architectural/construction progress with unordered photo collections and 3D building models. With our interface, a user guides the registration of the model in one of the images, and our system automatically computes the alignment for the rest of the photos using a novel Structure-from-Motion (SfM) technique; images with nearb...

متن کامل

A Margin-based Model with a Fast Local Searchnewline for Rule Weighting and Reduction in Fuzzynewline Rule-based Classification Systems

Fuzzy Rule-Based Classification Systems (FRBCS) are highly investigated by researchers due to their noise-stability and  interpretability. Unfortunately, generating a rule-base which is sufficiently both accurate and interpretable, is a hard process. Rule weighting is one of the approaches to improve the accuracy of a pre-generated rule-base without modifying the original rules. Most of the pro...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

ژورنال

عنوان ژورنال: Bioinformatics

سال: 2009

ISSN: 1367-4803,1460-2059

DOI: 10.1093/bioinformatics/btp173